Computational Studies on the Decarboxylation of 2-(1-Carboxy-1-hydroxyethyl)-3,4-dimethylthiazolium Dipolar Ion, an Analog of the Complex of Pyruvic Acid and Coenzyme of Pyruvate Decarboxylase

Yasushi Nakajima*, Yoshikatsu Sakagishi, Michio Shiibashi, Yuuji Suzuki, Hitoshi Kato

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

1 Citation (Scopus)

Abstract

We have obtained the optimized geometrical structure of 2-(1-carboxy-1-hydroxyethyl)-3,4-dimethylthiazolium dipolar ion and investigated its geometric and electric changes during decarboxylation process by the MNDO-PM3 method, a molecular orbital method. The salient features of the optimized structure are that the dihedral angle of C4-C1-C2-S3 is 5.4° and the distance between thiazolium S3 and carboxyl O6 is about 1.8Å (the bond order between S3 and O6 is about 0.4). The lowest energy decarboxylation profile is the following process. First the dihedral angle of C4-C1-C2-S3 becomes about 90°, then the distance between C1-C2 increases while the dihedral angle holds about 90°, and finally the C1-C2 bond disappears. The most remarkable change caused by the 90° rotation is the disappearance of the S3-O6 bond, and this disappearance causes electric changes that prompt the decarboxylation.

Original languageEnglish
Pages (from-to)449-454
Number of pages6
JournalBiochemical and Biophysical Research Communications
Volume195
Issue number1
DOIs
Publication statusPublished - 1993 Aug 31
Externally publishedYes

ASJC Scopus subject areas

  • Biophysics
  • Biochemistry
  • Molecular Biology
  • Cell Biology

Fingerprint

Dive into the research topics of 'Computational Studies on the Decarboxylation of 2-(1-Carboxy-1-hydroxyethyl)-3,4-dimethylthiazolium Dipolar Ion, an Analog of the Complex of Pyruvic Acid and Coenzyme of Pyruvate Decarboxylase'. Together they form a unique fingerprint.

Cite this