TY - JOUR
T1 - Hybrid approach for ab initio molecular dynamics simulation combining energy density analysis and short-time Fourier transform
T2 - Energy transfer spectrogram
AU - Yamauchi, Yusuke
AU - Nakai, Hiromi
N1 - Funding Information:
Part of the calculations was performed at the Research Center for Computational Science (RCCS) of the National Institutes of Natural Sciences and the Media Network Center (MNC) of Waseda University. This study was partially supported by a Grant-in-Aid for Young Scientists (A) ‘KAKENHI 14703005’ from the Japanese Society for the Promotion of Science (JSPS), by a NAREGI Nano-Science Project of the Japanese Ministry of Education, Culture, Sports, Science and Technology (MEXT), by the 21st Century Center Of Excellence (21COE) “Practical Nano-Chemistry” from MEXT, by a project of the Advanced Research Institute for Science and Engineering (RISE) of Waseda University, and by a grant from the Association for the Progress of New Chemistry, Japan.
PY - 2005
Y1 - 2005
N2 - We propose a new analysis technique for specifying molecular vibrational modes related with intramolecular and/or intermolecular energy transfer in ab initio molecular dynamics simulation of chemical reaction. The technique combines the short-time Fourier transform method with energy density analysis, which partitions the quantum chemical potential energy in the system into atomic contributions. The image obtained by the combined scheme, termed an energy transfer spectrogram (ETS), enables us to understand the dynamics of energy transfer by time-frequency representation. The time change of the local energy is quite important in chemical reactions. In order to assess the performance of the ETS, its application to the collision reaction between two carbon dioxide molecules is shown.
AB - We propose a new analysis technique for specifying molecular vibrational modes related with intramolecular and/or intermolecular energy transfer in ab initio molecular dynamics simulation of chemical reaction. The technique combines the short-time Fourier transform method with energy density analysis, which partitions the quantum chemical potential energy in the system into atomic contributions. The image obtained by the combined scheme, termed an energy transfer spectrogram (ETS), enables us to understand the dynamics of energy transfer by time-frequency representation. The time change of the local energy is quite important in chemical reactions. In order to assess the performance of the ETS, its application to the collision reaction between two carbon dioxide molecules is shown.
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U2 - 10.1063/1.1940635
DO - 10.1063/1.1940635
M3 - Article
AN - SCOPUS:23744432327
SN - 0021-9606
VL - 123
JO - Journal of Chemical Physics
JF - Journal of Chemical Physics
IS - 3
M1 - 034101
ER -