@article{199ca584b3fb45fab8c91a5fc6be14c4,
title = "New tools and functions in data-out activities at Protein Data Bank Japan (PDBj)",
abstract = "The Protein Data Bank Japan (PDBj), a member of the worldwide Protein Data Bank (wwPDB), accepts and processes the deposited data of experimentally determined biological macromolecular structures. In addition to archiving the PDB data in collaboration with the other wwPDB partners, PDBj also provides a wide range of original and unique services and tools, which are continuously improved and updated. Here, we report the new RDB PDBj Mine 2, the WebGL molecular viewer Molmil, the ProMode-Elastic server for normal mode analysis, a virtual reality system for the eF-site protein electrostatic molecular surfaces, the extensions of the Omokage search for molecular shape similarity, and the integration of PDBj and BMRB searches.",
keywords = "BMRB, PDB, protein structures, semantic web, structural dynamics, virtual reality",
author = "Kinjo, {Akira R.} and Bekker, {Gert Jan} and Hiroshi Wako and Shigeru Endo and Yuko Tsuchiya and Hiromu Sato and Hafumi Nishi and Kengo Kinoshita and Hirofumi Suzuki and Takeshi Kawabata and Masashi Yokochi and Takeshi Iwata and Naohiro Kobayashi and Toshimichi Fujiwara and Genji Kurisu and Haruki Nakamura",
note = "Funding Information: This is an open access article under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non?commercial and no modifications or adaptations are made.Abbreviations: PDB, Protein Data Bank; BMRB, BioMagResBank; EMDB, Electron Microscopy Data Bank; iDR, incremental Distance Rank This work was supported by grants from the Database Integration Coordination Program from the National Bioscience Database Center (NBDC)-JST (Japan Science and Technology Agency), the Platform Project for Supporting in Drug Discovery and Life Science Research (Platform for Drug Discovery, Informatics, and Structural Life Science) from AMED, and JSPS KAKENHI [26440078] and [17K07364]. Publisher Copyright: {\textcopyright} 2017 The Authors Protein Science published by Wiley Periodicals, Inc. on behalf of The Protein Society",
year = "2018",
month = jan,
doi = "10.1002/pro.3273",
language = "English",
volume = "27",
pages = "95--102",
journal = "Protein Science",
issn = "0961-8368",
publisher = "Cold Spring Harbor Laboratory Press",
number = "1",
}