RNA-Seq Analysis of Equine Conceptus Transcripts during Embryo Fixation and Capsule Disappearance

Yurika Tachibana, Toshihiro Sakurai, Hanako Bai, Kunio Shiota, Yasuo Nambo, Kentaro Nagaoka, Kazuhiko Imakawa

Research output: Contribution to journalArticlepeer-review

3 Citations (Scopus)


Extensive studies have been conducted to characterize the unique phenomena of equine pregnancy. Most studies have focused on embryo transmigration when the embryo is covered with a mucin-like glycoprotein capsule and on the characterization of the chorionic girdle and chorionic gonadotropin (CG) secretion. However, the events preceding and following capsule disappearance have not been well studied. In this study, the mRNA expression in conceptus membranes at days 19, 21, and 25 (day 05day of ovulation) was analyzed by RNA-seq (SOLiD3), and transcript levels on these three days and day 13 were confirmed by real-time PCR. Of the 26,416 equine genes registered, 20,436 transcripts were aligned to sequences in the Ensembl database, from which 4,625 transcripts were registered in both Ensembl and the KEGG pathway. Each of the 4,625 transcripts was examined through KEGG pathway analysis, and 12 transcripts of integrins (ITGs) and collagens (COLs) were confirmed through real-time PCR. Our data indicated that extracellular matrix (ECM)-related mRNAs were highly expressed in day 19, 21, and 25 conceptus membranes. In combination with previous results, which confirmed a lack of laminin and fibronectin transcript expression in the endometrium, these observations suggest that in contrast to attachment through focal adhesion, conceptus chorionic membrane ECMs function as a scaffold-like structure to possibly maintain the shape of the conceptus and a separation between chorionic membranes and the uterine luminal epithelium.

Original languageEnglish
Article numbere114414
JournalPLoS One
Issue number12
Publication statusPublished - 2014 Dec 1
Externally publishedYes

ASJC Scopus subject areas

  • General Agricultural and Biological Sciences
  • General Biochemistry,Genetics and Molecular Biology
  • General Medicine


Dive into the research topics of 'RNA-Seq Analysis of Equine Conceptus Transcripts during Embryo Fixation and Capsule Disappearance'. Together they form a unique fingerprint.

Cite this