TY - JOUR
T1 - A Characterization of Minimum Spanning Tree-Like Metric Spaces
AU - Hayamizu, Momoko
AU - Endo, Hiroshi
AU - Fukumizu, Kenji
N1 - Publisher Copyright:
© 2017 IEEE.
PY - 2017/3/1
Y1 - 2017/3/1
N2 - Recent years have witnessed a surge of biological interest in the minimum spanning tree (MST) problem for its relevance to automatic model construction using the distances between data points. Despite the increasing use of MST algorithms for this purpose, the goodness-of-fit of an MST to the data is often elusive because no quantitative criteria have been developed to measure it. Motivated by this, we provide a necessary and sufficient condition to ensure that a metric space on $n$ points can be represented by a fully labeled tree on $n$ vertices, and thereby determine when an MST preserves all pairwise distances between points in a finite metric space.
AB - Recent years have witnessed a surge of biological interest in the minimum spanning tree (MST) problem for its relevance to automatic model construction using the distances between data points. Despite the increasing use of MST algorithms for this purpose, the goodness-of-fit of an MST to the data is often elusive because no quantitative criteria have been developed to measure it. Motivated by this, we provide a necessary and sufficient condition to ensure that a metric space on $n$ points can be represented by a fully labeled tree on $n$ vertices, and thereby determine when an MST preserves all pairwise distances between points in a finite metric space.
KW - Cellular differentiation
KW - distance-based tree estimation
KW - four-point condition
KW - fourth-point condition
KW - minimum spanning tree
UR - http://www.scopus.com/inward/record.url?scp=85017119001&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85017119001&partnerID=8YFLogxK
U2 - 10.1109/TCBB.2016.2550431
DO - 10.1109/TCBB.2016.2550431
M3 - Article
C2 - 27076458
AN - SCOPUS:85017119001
SN - 1545-5963
VL - 14
SP - 468
EP - 471
JO - IEEE/ACM Transactions on Computational Biology and Bioinformatics
JF - IEEE/ACM Transactions on Computational Biology and Bioinformatics
IS - 2
M1 - 7447693
ER -