TY - JOUR
T1 - A network-based classification framework for predicting treatment response of schizophrenia patients
AU - Zamani Esfahlani, Farnaz
AU - Visser, Katherine
AU - Strauss, Gregory P.
AU - Sayama, Hiroki
N1 - Publisher Copyright:
© 2018 Elsevier Ltd
PY - 2018/11/1
Y1 - 2018/11/1
N2 - Knowledge-based systems including expert systems are one of the core components of clinical decision support systems. Nonetheless, modeling the uncertainty in medical knowledge is one of the main challenges of developing and employing such systems. Among various disorders, mental disorders are especially difficult to model because of their interconnected symptoms that give rise to complex outcomes such as resistance to different treatments. Here, we propose a network-based classification framework to distinguish treatment resistant schizophrenia patients from treatment responsive ones. Within this network-based framework, different antipsychotic medications are considered as external agents that change different properties of a symptoms interaction network where each node of the network represents one symptom. The overall goal of this study is to identify the symptoms that play a major role in responsiveness of the patients to antipsychotic medications. The proposed framework was tested using Clinical Antipsychotic Trials of Intervention Effectiveness (CATIE) dataset and compared with three other commonly used feature selection methods: reliefF, Support Vector Machine (SVM) weights, and information gain. According to the results, features selected based on information gain and network analysis provided better classification performance, while the latter also considered the interactions of symptoms and is more interpretable.
AB - Knowledge-based systems including expert systems are one of the core components of clinical decision support systems. Nonetheless, modeling the uncertainty in medical knowledge is one of the main challenges of developing and employing such systems. Among various disorders, mental disorders are especially difficult to model because of their interconnected symptoms that give rise to complex outcomes such as resistance to different treatments. Here, we propose a network-based classification framework to distinguish treatment resistant schizophrenia patients from treatment responsive ones. Within this network-based framework, different antipsychotic medications are considered as external agents that change different properties of a symptoms interaction network where each node of the network represents one symptom. The overall goal of this study is to identify the symptoms that play a major role in responsiveness of the patients to antipsychotic medications. The proposed framework was tested using Clinical Antipsychotic Trials of Intervention Effectiveness (CATIE) dataset and compared with three other commonly used feature selection methods: reliefF, Support Vector Machine (SVM) weights, and information gain. According to the results, features selected based on information gain and network analysis provided better classification performance, while the latter also considered the interactions of symptoms and is more interpretable.
KW - Classification
KW - Feature selection
KW - Network analysis
KW - Schizophrenia
KW - Treatment resistance
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U2 - 10.1016/j.eswa.2018.05.005
DO - 10.1016/j.eswa.2018.05.005
M3 - Article
AN - SCOPUS:85047651750
SN - 0957-4174
VL - 109
SP - 152
EP - 161
JO - Expert Systems with Applications
JF - Expert Systems with Applications
ER -