TY - JOUR
T1 - Brain response pattern identification of fMRI data using a particle swarm optimization-based approach
AU - Ma, Xinpei
AU - Chou, Chun An
AU - Sayama, Hiroki
AU - Chaovalitwongse, Wanpracha Art
N1 - Funding Information:
Authors thank financial support from the National Science Foundation (award number: 1319152) (Xinpei Ma and Hiroki Sayama) and the Research Foundation for SUNY Grant (# 66508) (Chun-An Chou).
Publisher Copyright:
© 2016, The Author(s).
PY - 2016/9/1
Y1 - 2016/9/1
N2 - Many neuroscience studies have been devoted to understand brain neural responses correlating to cognition using functional magnetic resonance imaging (fMRI). In contrast to univariate analysis to identify response patterns, it is shown that multi-voxel pattern analysis (MVPA) of fMRI data becomes a relatively effective approach using machine learning techniques in the recent literature. MVPA can be considered as a multi-objective pattern classification problem with the aim to optimize response patterns, in which informative voxels interacting with each other are selected, achieving high classification accuracy associated with cognitive stimulus conditions. To solve the problem, we propose a feature interaction detection framework, integrating hierarchical heterogeneous particle swarm optimization and support vector machines, for voxel selection in MVPA. In the proposed approach, we first select the most informative voxels and then identify a response pattern based on the connectivity of the selected voxels. The effectiveness of the proposed approach was examined for the Haxby’s dataset of object-level representations. The computational results demonstrated higher classification accuracy by the extracted response patterns, compared to state-of-the-art feature selection algorithms, such as forward selection and backward selection.
AB - Many neuroscience studies have been devoted to understand brain neural responses correlating to cognition using functional magnetic resonance imaging (fMRI). In contrast to univariate analysis to identify response patterns, it is shown that multi-voxel pattern analysis (MVPA) of fMRI data becomes a relatively effective approach using machine learning techniques in the recent literature. MVPA can be considered as a multi-objective pattern classification problem with the aim to optimize response patterns, in which informative voxels interacting with each other are selected, achieving high classification accuracy associated with cognitive stimulus conditions. To solve the problem, we propose a feature interaction detection framework, integrating hierarchical heterogeneous particle swarm optimization and support vector machines, for voxel selection in MVPA. In the proposed approach, we first select the most informative voxels and then identify a response pattern based on the connectivity of the selected voxels. The effectiveness of the proposed approach was examined for the Haxby’s dataset of object-level representations. The computational results demonstrated higher classification accuracy by the extracted response patterns, compared to state-of-the-art feature selection algorithms, such as forward selection and backward selection.
KW - Brain functional connectivity
KW - Brain response pattern
KW - Feature selection
KW - Interaction selection
KW - Particle swarm optimization
KW - Pattern classification
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U2 - 10.1007/s40708-016-0049-z
DO - 10.1007/s40708-016-0049-z
M3 - Article
AN - SCOPUS:85046027829
SN - 2198-4018
VL - 3
SP - 181
EP - 192
JO - Brain Informatics
JF - Brain Informatics
IS - 3
ER -